Explore projects

GEMsembler tool for assembling and comparing several types of Genome-Scale Metabolic Models (GEMs)

Server to implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik and TensorFlow.

Rendered at: https://grp-bio-it.embl-community.io/template-pages-mkdocs

Simona Gioe, Jona Rada, Hidenobou Miyazawa, Sapna Chhabra - Aulehla Group; Christian Tischer, Arif Khan - Centre for Bioimage Analysis

BIOcean5D exports to EcoTaxa

Spherical harmonic (A_lm) representations of scattering amplitude, using GPU computation

Clean repository for the working version of SIAMCAT.

A practical example about how to run a MongoDB service on demand in the HPC cluster.

Scripts to minimize atomic structures, for example, from AlphaFold.