Explore projects

Franziska Walterspiel - Deo Group, EMBL Heidelberg;

Christian Tischer, Arif Khan - Bioimage Analysis Service Team, EMBL Heidelberg;

Notes and SLURM templates for using AlphaFold and related tools on the EMBL HD cluser

Collection of repositories used in kefir course

Krim Anlas - Trivedi lab;

Nicola Gritti - MIF

Keywords: bioimage analysis, support, MIF, python, matlab, TGMM, gastruloids, TGMM, tracking

Nick Marschlich - Trivedi lab;

Nicola Gritti - MIF

Keywords: bioimage analysis, support, MIF, python, pescoids, ultrack, ome-zarr, napari, tracking

This repository contains recipes to build all the containers I use in my pipelines

Source code for "Genome-wide quantification of differential transcription factor activity: diffTF"