Explore projects

Container for a napari-based image annotation tool in an ubuntu-based vnc desktop

Analysis code for a study on oral-fecal microbial transmission.

Microscopy Pipeline Constructor (MyPiC)

The Bio-IT Community blog can be found in https://git.embl.de/grp-bio-it/blog

pages at https://grp-bio-it-workshops.embl-community.io/intermediate-python

pages at https://grp-bio-it-workshops.embl-community.io/intermediate-python

Tools to design primers optimised for mutliplex PCRs and RT reactions.

This is an example how snakemake can detected failed slurm jobs.

Immunofluorescence based assay for detecting immunity against covid-19. Collaboration with Vibor Lateka.

Recommended resources for learning computational research / bioinformatics skills online

indeXplorer is a software suite that integrates flow cytometry and scRNAseq data analysis in a single graphical user interface.