Update Home authored by Vitali Vistunou's avatar Vitali Vistunou
......@@ -7,7 +7,7 @@ Here we explain how to install and use Fluorescence Correlation Spectroscopy (FC
#### 4. [Interactive Visualisation of Calibration Plot](#interactive-visualisation-of-calibration-plot)
#### 5. [Output files](#output-files)
#### Installation
1. Download the latest [KNIME Analytics Platform] It is available for Windows, Linux, and Mac OS X.(https://www.knime.com/downloads).
1. Download the latest [KNIME Analytics Platform](https://www.knime.com/downloads). It is available for Windows, Linux, and Mac OS X.
> Take a look on [Getting Started](https://www.knime.com/knime) for a brief introduction into KNIME Analytics Platform.
2. Install the [KNIME Python Integration](https://docs.knime.com/2018-12/python_installation_guide/index.html) to be used with KNIME Analytics Platform.
3. Save and unzip [fcs_pipeline.zip](https://git.embl.de/halavaty/fcs-pipelines-vitali-vistunou) in knime-workspace directory (created after KNIME installation) in your PC. fcs_pipeline directory includes all files needed for fcs pipeline to work.
......@@ -38,7 +38,7 @@ Here we explain how to install and use Fluorescence Correlation Spectroscopy (FC
> For the execution of all nodes at one time, click on the green bottom (Execute all executable nodes) at the top of the KNIME window or just press a shortcut: Shift+F7.
#### Interactive Visualisation of Calibration Plot
1. Pick the point of interest in the calibration plot window to see fluctuation and correlation data from respective FCS point.
1. Pick the point of interest in the calibration plot window to see fluctuation and correlation data from respective FCS position.
2. Check the statistics parameters and level of bleaching at the headings of plots.
2. The menu of the plot windows can be used to:
* Save the image of the plot
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