Update Home authored by Vitali Vistunou's avatar Vitali Vistunou
...@@ -21,19 +21,16 @@ Follow these steps as described in [KNIME Python Integration Installation Guide] ...@@ -21,19 +21,16 @@ Follow these steps as described in [KNIME Python Integration Installation Guide]
``` ```
conda env create -f <PATH-TO-FOLDER-WITH-fcspy.yml>/fcspy.yml conda env create -f <PATH-TO-FOLDER-WITH-fcspy.yml>/fcspy.yml
``` ```
* For Windows user: create py36.bat that contains path to your Anaconda folder (**must contain Scripts folder**): * For Windows user: create py36.bat that with the path to your Anaconda folder (**must contain Scripts folder**):
``` ```
@REM Adapt the folder in the PATH to your system @REM Adapt the folder in the PATH to your system
SET PATH=<PATH_TO_ANACONDA_FOLDER>\Scripts;%PATH% SET PATH=<PATH_TO_ANACONDA_FOLDER>\Scripts;%PATH%
CALL activate py36_knime || ECHO Activating python environment failed CALL activate py36_knime || ECHO Activating python environment failed
@python %* @python %*
``` ```
* For Linux users: create py36.sh that contains path to your Anaconda folder (**must contain bin folder**): * For Linux users: create py36.sh with the path to your Anaconda folder (**must contain bin folder**):
```
```
Examples of files are [here](https://git.embl.de/halavaty/fcs-pipelines-vitali-vistunou)( (py36.bat and py35.sh)
6. Download [fcs_pipeline.zip](https://git.embl.de/halavaty/fcs-pipelines-vitali-vistunou) on your computer and unzip it into knime-workspace directory. 6. Download [fcs_pipeline_2.zip](https://git.embl.de/halavaty/fcs-pipelines-vitali-vistunou) on your computer and unzip it into the knime-workspace directory.
#### Structure of workflow #### Structure of workflow
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